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  5. Sobic.007G005400.1

Sobic.007G005400.1


Description : co-chaperone *(Hsp40)


Gene families : OG_42_0001512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G005400.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Bradi3g54550 No alias Molecular chaperone Hsp40/DnaJ family protein 0.02 Orthogroups_2024-Update
Bradi4g41060 No alias DNAJ heat shock family protein 0.04 Orthogroups_2024-Update
LOC_Os03g12236 No alias heat shock protein DnaJ, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00011218-RA No alias (at2g22360 : 484.0) DNAJ heat shock family protein;... 0.03 Orthogroups_2024-Update
Potri.003G031800 No alias Molecular chaperone Hsp40/DnaJ family protein 0.05 Orthogroups_2024-Update
Potri.005G073900 No alias DNAJ heat shock family protein 0.03 Orthogroups_2024-Update
Seita.6G063600.1 No alias co-chaperone *(Hsp40) 0.05 Orthogroups_2024-Update
Sopen03g037380 No alias DnaJ C terminal domain 0.02 Orthogroups_2024-Update
evm.model.contig_4410.1 No alias (at1g80030 : 271.0) Molecular chaperone Hsp40/DnaJ... 0.02 Orthogroups_2024-Update
evm.model.tig00021350.15 No alias (at1g80030 : 317.0) Molecular chaperone Hsp40/DnaJ... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA 16Dec
MF GO:0051082 unfolded protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 231 294
IPR001623 DnaJ_domain 90 151
IPR002939 DnaJ_C 206 421
No external refs found!