1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G008800.1

Sobic.007G008800.1


Description : ubiquitin adaptor protein *(TOL)


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G008800.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi3g10150 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
Bradi4g23190 No alias Target of Myb protein 1 0.02 Orthogroups_2024-Update
Brara.F02249.1 No alias ubiquitin adaptor protein *(TOL) 0.02 Orthogroups_2024-Update
LOC_Os01g12880 No alias VHS and GAT domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.016G131900 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Potri.018G039100 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
Pp1s49_145V6 No alias vhs domain-containing protein gat domain-containing protein 0.02 Orthogroups_2024-Update
Seita.4G162300.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Solyc08g068370 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** A0A061GKP2_THECC) 0.02 Orthogroups_2024-Update
Solyc09g014790 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
MF GO:0043130 ubiquitin binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004152 GAT_dom 192 264
IPR002014 VHS_dom 5 113
No external refs found!