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  5. Sobic.007G017400.3

Sobic.007G017400.3


Description : Unknown function


Gene families : OG_42_0001723 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G017400.3
Cluster HCAA Clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Bradi4g26487 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0035550 urease complex IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 201 267
IPR000504 RRM_dom 297 365
IPR000504 RRM_dom 121 191
No external refs found!