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  5. Sobic.007G020800.1

Sobic.007G020800.1


Description : Unknown function


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G020800.1
Cluster HCAA Clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Brara.B00749.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Glyma.04G006500 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
Glyma.06G279500 No alias SAUR-like auxin-responsive protein family 0.01 Orthogroups_2024-Update
Glyma.09G221400 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G017790.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g02520 No alias OsSAUR31 - Auxin-responsive SAUR gene family member, expressed 0.02 Orthogroups_2024-Update
MA_51912g0030 No alias (at2g18010 : 91.3) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
Mp6g08420.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00053366-RA No alias (at2g21220 : 103.0) SAUR-like auxin-responsive protein... 0.02 Orthogroups_2024-Update
Solyc01g110590 No alias Small auxin up-regulated RNA6 0.03 Orthogroups_2024-Update
Solyc01g111000 No alias Auxin responsive SAUR protein (AHRD V3.3 *** A0A118K2C1_CYNCS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 15 81
No external refs found!