1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G025700.1

Sobic.007G025700.1


Description : amino acid transporter *(LHT)


Gene families : OG_42_0000536 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G025700.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
127270 No alias lysine histidine transporter 1 0.03 Orthogroups_2024-Update
270979 No alias lysine histidine transporter 1 0.02 Orthogroups_2024-Update
At1g25530 No alias Lysine histidine transporter-like 6... 0.07 Orthogroups_2024-Update
At1g67640 No alias Lysine histidine transporter-like 2... 0.03 Orthogroups_2024-Update
Bradi3g14140 No alias lysine histidine transporter 1 0.04 Orthogroups_2024-Update
Bradi3g14150 No alias lysine histidine transporter 1 0.03 Orthogroups_2024-Update
Brara.D01095.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
GRMZM2G429322 No alias lysine histidine transporter 1 0.03 Orthogroups_2024-Update
MA_126371g0010 No alias (at5g40780 : 604.0) Encodes LHT1 (lysine histidine... 0.03 Orthogroups_2024-Update
Potri.001G335300 No alias lysine histidine transporter 1 0.02 Orthogroups_2024-Update
Pp1s5_176V6 No alias amino acid 0.02 Orthogroups_2024-Update
Pp1s79_71V6 No alias amino acid 0.01 Orthogroups_2024-Update
Seita.6G078200.1 No alias amino acid transporter *(LHT) 0.1 Orthogroups_2024-Update
Seita.6G078300.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
Seita.6G078400.1 No alias amino acid transporter *(LHT) 0.05 Orthogroups_2024-Update
Seita.6G078700.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
Seita.6G097200.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
Seita.7G125900.1 No alias amino acid transporter *(LHT) 0.02 Orthogroups_2024-Update
Sobic.007G025800.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
Sobic.007G092400.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
Sopen03g030210 No alias Transmembrane amino acid transporter protein 0.03 Orthogroups_2024-Update
Sopen05g005520 No alias Transmembrane amino acid transporter protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 49 443
No external refs found!