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  5. Sobic.007G025900.1

Sobic.007G025900.1


Description : amino acid transporter *(LHT)


Gene families : OG_42_0000536 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G025900.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
413158 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
A4A49_06284 No alias lysine histidine transporter 1 0.03 Orthogroups_2024-Update
At1g25530 No alias Lysine histidine transporter-like 6... 0.04 Orthogroups_2024-Update
At1g48640 No alias Lysine histidine transporter-like 1... 0.03 Orthogroups_2024-Update
At5g40780 No alias Lysine histidine transporter 1... 0.05 Orthogroups_2024-Update
Bradi3g14140 No alias lysine histidine transporter 1 0.05 Orthogroups_2024-Update
Bradi3g14150 No alias lysine histidine transporter 1 0.04 Orthogroups_2024-Update
Brara.I00282.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
GRMZM2G127294 No alias lysine histidine transporter 1 0.04 Orthogroups_2024-Update
GRMZM2G175321 No alias lysine histidine transporter 2 0.04 Orthogroups_2024-Update
Glyma.19G076800 No alias lysine histidine transporter 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G123160.3 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
HORVU7Hr1G074660.3 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
MA_10432111g0020 No alias (at1g24400 : 620.0) High-affinity transporter for... 0.03 Orthogroups_2024-Update
MA_106166g0010 No alias (at5g40780 : 597.0) Encodes LHT1 (lysine histidine... 0.03 Orthogroups_2024-Update
PSME_00016338-RA No alias (at5g40780 : 430.0) Encodes LHT1 (lysine histidine... 0.02 Orthogroups_2024-Update
Seita.6G078200.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
Seita.6G078300.1 No alias amino acid transporter *(LHT) 0.07 Orthogroups_2024-Update
Sobic.007G025800.1 No alias amino acid transporter *(LHT) 0.05 Orthogroups_2024-Update
Solyc03g111040 No alias Amino acid transporter, putative (AHRD V3.3 *** B9RAK8_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 82 482
No external refs found!