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  5. Sobic.007G032100.1

Sobic.007G032100.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G032100.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
A4A49_02283 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
A4A49_31875 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
Brara.C04575.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I05464.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g024970 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 304 528
IPR001356 Homeobox_dom 111 166
No external refs found!