At3g62890

Description : Pentatricopeptide repeat-containing protein At3g62890 [Source:UniProtKB/Swiss-Prot;Acc:Q683I9]

Gene families : OG_42_0009211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009211_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g62890
Cluster	HCCA clusters: Cluster_43

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004797	thymidine kinase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Predicted GO
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predicted GO
MF	GO:0019206	nucleoside kinase activity	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	341	364
IPR002885	Pentatricopeptide_repeat	101	122
IPR002885	Pentatricopeptide_repeat	238	259
IPR002885	Pentatricopeptide_repeat	407	435
IPR002885	Pentatricopeptide_repeat	131	155
IPR032867	DYW_dom	439	563
IPR002885	Pentatricopeptide_repeat	264	312
IPR002885	Pentatricopeptide_repeat	158	209

External Links

No external refs found!