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  5. Sobic.007G035300.1

Sobic.007G035300.1


Description : EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase


Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G035300.1
Cluster HCAA Clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G108514 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.04 Orthogroups_2024-Update
Seita.2G117700.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA 16Dec
BP GO:0019752 carboxylic acid metabolic process IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 60 442
No external refs found!