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  5. Sobic.007G039200.1

Sobic.007G039200.1


Description : MYB-RELATED transcription factor *(MYB-R-R)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G039200.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_30711 No alias transcription factor myb1r1 0.02 Orthogroups_2024-Update
Glyma.08G290100 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G354800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s256_11V6 No alias dna binding 0.01 Orthogroups_2024-Update
Seita.3G225500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc10g076820 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004358 glutamate N-acetyltransferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 101 146
No external refs found!