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  5. Sobic.007G046900.1

Sobic.007G046900.1


Description : Unknown function


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G046900.1

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G084920.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g40490 No alias BTB/POZ domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g41220 No alias BTB/POZ domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g29100 No alias MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
Solyc09g072980 No alias BTB/POZ/MATH-domain protein (AHRD V3.3 *** G7I2K6_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 157 268
IPR002083 MATH/TRAF_dom 31 132
No external refs found!