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  5. Sobic.007G060800.1

Sobic.007G060800.1


Description : Unknown function


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G060800.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G000130.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G005520.5 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU2Hr1G040600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G119380.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G085290.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G125350.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G028220.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G121050.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g26430 No alias resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g27370 No alias resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g07340 No alias mla1, putative, expressed 0.02 Orthogroups_2024-Update
Seita.7G288400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G130500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G191800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G192200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G195000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G195500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 22 162
No external refs found!