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  5. Sobic.007G065400.1

Sobic.007G065400.1


Description : component *(Pcf11) of Cleavage Factor II (CF-IIm) complex


Gene families : OG_42_0001726 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001726_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G065400.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Bradi3g15320 No alias PCF11P-similar protein 4 0.05 Orthogroups_2024-Update
Glyma.03G191200 No alias ENTH/VHS family protein 0.02 Orthogroups_2024-Update
Glyma.10G251100 No alias PCF11P-similar protein 4 0.03 Orthogroups_2024-Update
Glyma.19G191800 No alias ENTH/VHS family protein 0.03 Orthogroups_2024-Update
Glyma.19G191900 No alias ENTH/VHS family protein 0.02 Orthogroups_2024-Update
PSME_00017126-RA No alias (at2g36480 : 211.0) ENTH/VHS family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00040454-RA No alias (at4g04885 : 238.0) Encodes PCFS4 (Pcf11p-similar... 0.03 Orthogroups_2024-Update
evm.model.tig00000396.26 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006569 CID_dom 51 143
No external refs found!