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  5. Sobic.007G066500.1

Sobic.007G066500.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G066500.1
Cluster HCAA Clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
227274 No alias Function unknown 0.06 Orthogroups_2024-Update
270502 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
A4A49_25619 No alias germin-like protein subfamily 1 member 7 0.04 Orthogroups_2024-Update
A4A49_25621 No alias germin-like protein subfamily 1 member 7 0.03 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B03608.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G007900 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Glyma.17G049800 No alias germin 3 0.03 Orthogroups_2024-Update
Glyma.20G220800 No alias RmlC-like cupins superfamily protein 0.08 Orthogroups_2024-Update
HORVU3Hr1G002000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU4Hr1G090190.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G089510.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G091800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp5g13870.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Orthogroups_2024-Update
Sobic.001G050100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G065900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G066608.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G066824.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g113580 No alias Germin-like protein (AHRD V3.3 *** Q8H2A6_ANACO) 0.03 Orthogroups_2024-Update
Sopen01g035090 No alias Cupin 0.03 Orthogroups_2024-Update
Sopen01g044830 No alias Cupin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP Predicted GO
CC GO:0005885 Arp2/3 protein complex IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0007015 actin filament organization IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0010638 positive regulation of organelle organization IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030838 positive regulation of actin filament polymerization IEP Predicted GO
BP GO:0031334 positive regulation of protein complex assembly IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032273 positive regulation of protein polymerization IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0045010 actin nucleation IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051495 positive regulation of cytoskeleton organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
BP GO:0097435 supramolecular fiber organization IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 212
No external refs found!