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  5. Sobic.007G067108.1

Sobic.007G067108.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G067108.1
Cluster HCAA Clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
109767 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
109968 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
109995 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
227274 No alias Function unknown 0.04 Orthogroups_2024-Update
229376 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
271728 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
444186 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
446428 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
A4A49_08369 No alias nectarin-1 0.02 Orthogroups_2024-Update
At3g05950 No alias Germin-like protein subfamily 1 member 7... 0.03 Orthogroups_2024-Update
At5g20630 No alias Germin-like protein subfamily 3 member 3... 0.02 Orthogroups_2024-Update
Glyma.16G061400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g08960 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00043689-RA No alias (at1g09560 : 232.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
PSME_00052809-RA No alias (at5g20630 : 236.0) Encodes a germin-like protein. Its... 0.03 Orthogroups_2024-Update
PSME_00055631-RA No alias (at4g14630 : 229.0) germin-like protein with N-terminal... 0.03 Orthogroups_2024-Update
Potri.013G000500 No alias germin-like protein 5 0.02 Orthogroups_2024-Update
Pp1s82_6V6 No alias F14J9.22; germin-like protein (GLP4) (GLP5) [Arabidopsis... 0.02 Orthogroups_2024-Update
Sopen01g035090 No alias Cupin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 212
No external refs found!