1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G070500.1

Sobic.007G070500.1


Description : Unknown function


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G070500.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
At4g03630 No alias Putative nodulin [Source:UniProtKB/TrEMBL;Acc:Q9SY41] 0.03 Orthogroups_2024-Update
At4g05470 No alias RNI-like superfamily protein [Source:TAIR;Acc:AT4G05470] 0.03 Orthogroups_2024-Update
At5g52480 No alias Nodulin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FHB4] 0.03 Orthogroups_2024-Update
Bradi1g61973 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.D01227.1 No alias Unknown function 0.07 Orthogroups_2024-Update
HORVU0Hr1G019800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G092720.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g013810 No alias No description available 0.03 Orthogroups_2024-Update
Sopen11g004820 No alias hypothetical protein 0.02 Orthogroups_2024-Update
evm.model.contig_3643.2 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 72
IPR001611 Leu-rich_rpt 210 228
IPR001611 Leu-rich_rpt 231 243
No external refs found!