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  5. Sobic.007G076200.2

Sobic.007G076200.2


Description : PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex


Gene families : OG_42_0001253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G076200.2
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Brara.K00846.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.02 Orthogroups_2024-Update
Solyc07g018270 No alias Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 131 249
No external refs found!