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  5. Sobic.007G081701.1

Sobic.007G081701.1


Description : Unknown function


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G081701.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18440 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Bradi4g23747 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Brara.D02411.1 No alias substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Brara.E03305.1 No alias substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
GRMZM2G404188 No alias BTB-POZ and MATH domain 1 0.03 Orthogroups_2024-Update
Glyma.16G036700 No alias BTB-POZ and MATH domain 4 0.03 Orthogroups_2024-Update
LOC_Os08g03500 No alias MBTB17 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
LOC_Os08g13250 No alias speckle-type POZ protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g29120 No alias speckle-type POZ protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g29330 No alias speckle-type POZ protein B, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g29380 No alias MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.04 Orthogroups_2024-Update
LOC_Os10g29950 No alias speckle-type POZ protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g41260 No alias snRNP protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00025854-RA No alias (at3g03740 : 139.0) BTB-POZ and MATH domain 4 (BPM4);... 0.02 Orthogroups_2024-Update
PSME_00026967-RA No alias (at3g03740 : 218.0) BTB-POZ and MATH domain 4 (BPM4);... 0.03 Orthogroups_2024-Update
Seita.6G216700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G010200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G191600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G038300.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 1 58
No external refs found!