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  5. Sobic.007G090424.1

Sobic.007G090424.1


Description : Unknown function


Gene families : OG_42_0000839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G090424.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Bradi2g26050 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G018000 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os08g14020 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g14109 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.03 Orthogroups_2024-Update
Seita.3G250600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G014300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002925 Dienelactn_hydro 58 264
No external refs found!