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  5. Sobic.007G090445.1

Sobic.007G090445.1


Description : Unknown function


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G090445.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_04683 No alias f-box protein skip19 0.07 Orthogroups_2024-Update
Bradi4g07650 No alias RNI-like superfamily protein 0.07 Orthogroups_2024-Update
Brara.C02647.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G172904 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G077730.1 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
LOC_Os02g52130 No alias OsFBX61 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g09450 No alias OsFBL41 - F-box domain and LRR containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g09580 No alias hypothetical protein 0.01 Orthogroups_2024-Update
LOC_Os08g09590 No alias OsFBL42 - F-box domain and LRR containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g09600 No alias F-box protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g09650 No alias OsFBX269 - F-box domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g09670 No alias F-box/LRR-repeat protein 22, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G142700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G033800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc08g013750 No alias F-box family protein (AHRD V3.3 *-* D7M2J7_ARALL) 0.03 Orthogroups_2024-Update
Solyc08g013790 No alias F-box/LRR protein (AHRD V3.3 *-* G7I6M1_MEDTR) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 38 85
No external refs found!