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  5. Sobic.007G092400.1

Sobic.007G092400.1


Description : amino acid transporter *(LHT)


Gene families : OG_42_0000536 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G092400.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
At1g25530 No alias Lysine histidine transporter-like 6... 0.03 Orthogroups_2024-Update
At5g40780 No alias Lysine histidine transporter 1... 0.03 Orthogroups_2024-Update
Bradi3g14140 No alias lysine histidine transporter 1 0.06 Orthogroups_2024-Update
Bradi3g14150 No alias lysine histidine transporter 1 0.05 Orthogroups_2024-Update
HORVU7Hr1G074640.13 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
HORVU7Hr1G074660.3 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
LOC_Os08g03350 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432111g0020 No alias (at1g24400 : 620.0) High-affinity transporter for... 0.04 Orthogroups_2024-Update
PSME_00005202-RA No alias (at5g40780 : 418.0) Encodes LHT1 (lysine histidine... 0.02 Orthogroups_2024-Update
Potri.015G091600 No alias lysine histidine transporter 1 0.03 Orthogroups_2024-Update
Seita.6G078200.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
Seita.6G078300.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
Seita.6G078400.1 No alias amino acid transporter *(LHT) 0.04 Orthogroups_2024-Update
Seita.6G078900.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update
Seita.6G097200.1 No alias amino acid transporter *(LHT) 0.05 Orthogroups_2024-Update
Sobic.007G025700.1 No alias amino acid transporter *(LHT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 39 435
No external refs found!