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  5. Sobic.007G106900.1

Sobic.007G106900.1


Description : Unknown function


Gene families : OG_42_0000292 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G106900.1
Cluster HCAA Clusters: Cluster_442

Target Alias Description ECC score Gene Family Method Actions
448444 No alias dicer-like 1 0.03 Orthogroups_2024-Update
Kfl00384_0060 kfl00384_0060_v1.1 (at1g01040 : 265.0) Encodes a Dicer homolog. Dicer is a... 0.06 Orthogroups_2024-Update
Potri.011G086700 No alias RNAse THREE-like protein 2 0.02 Orthogroups_2024-Update
Solyc08g067200 No alias Dicer-like protein 3 (AHRD V3.3 *-* X4Y6L7_SOLLC) 0.04 Orthogroups_2024-Update
Sopen08g021150 No alias Ribonuclease III domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEA 16Dec
BP GO:0006396 RNA processing IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 198 259
IPR000999 RNase_III_dom 64 170
No external refs found!