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  5. Sobic.007G116800.1

Sobic.007G116800.1


Description : regulatory protein of polygalacturonase activity


Gene families : OG_42_0001780 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G116800.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g26940 No alias BURP domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00005291-RA No alias (at1g60390 : 323.0) polygalacturonase 1 (PG1); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00011367-RA No alias (at1g60390 : 377.0) polygalacturonase 1 (PG1); FUNCTIONS... 0.06 Orthogroups_2024-Update
Solyc05g005540 No alias Polygalacturonase non-catalytic subunit AroGP3 (AHRD... 0.03 Orthogroups_2024-Update
Sopen03g033340 No alias BURP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 434 655
No external refs found!