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  5. Sobic.007G116950.1

Sobic.007G116950.1


Description : protein involved in PS-II assembly *(CYP38) & peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) & EC_5.2 cis-trans-isomerase


Gene families : OG_42_0005804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G116950.1
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
A4A49_03970 No alias peptidyl-prolyl cis-trans isomerase, chloroplastic 0.03 Orthogroups_2024-Update
Cre03.g189800 No alias cyclophilin 38 0.03 Orthogroups_2024-Update
HORVU7Hr1G062930.1 No alias protein involved in PS-II assembly *(CYP38) &... 0.12 Orthogroups_2024-Update
Kfl00014_0480 kfl00014_0480_v1.1 (at3g01480 : 448.0) Encodes a chloroplast cyclophilin... 0.11 Orthogroups_2024-Update
LOC_Os08g29370 No alias peptidyl-prolyl cis-trans isomerase, chloroplast... 0.04 Orthogroups_2024-Update
MA_7732g0010 No alias (o49939|tlp40_spiol : 582.0) Peptidyl-prolyl cis-trans... 0.04 Orthogroups_2024-Update
Potri.001G351400 No alias cyclophilin 38 0.03 Orthogroups_2024-Update
Potri.017G072800 No alias cyclophilin 38 0.06 Orthogroups_2024-Update
Pp1s149_77V6 No alias peptidyl-prolyl cis-trans isomerase 0.04 Orthogroups_2024-Update
Pp1s211_59V6 No alias peptidyl-prolyl cis-trans cyclophilin type 0.06 Orthogroups_2024-Update
Pp1s90_50V6 No alias peptidyl-prolyl cis-trans cyclophilin type 0.04 Orthogroups_2024-Update
Seita.6G127500.1 No alias protein involved in PS-II assembly *(CYP38) &... 0.14 Orthogroups_2024-Update
evm.model.tig00001371.20 No alias (at3g01480 : 194.0) Encodes a chloroplast cyclophilin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 247 405
No external refs found!