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  5. Sobic.007G120000.1

Sobic.007G120000.1


Description : subfamily ABCA transporter


Gene families : OG_42_0000851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G120000.1
Cluster HCAA Clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
At3g47770 No alias ABC transporter A family member 6... 0.03 Orthogroups_2024-Update
Seita.4G229700.1 No alias subfamily ABCA transporter 0.05 Orthogroups_2024-Update
Seita.6G136400.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
Solyc03g113060 No alias ABC transporter A family protein (AHRD V3.3 *** A0A072UUA7_MEDTR) 0.03 Orthogroups_2024-Update
evm.model.tig00020614.46 No alias (at3g47750 : 87.8) member of ATH subfamily; ATP binding... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 658 802
No external refs found!