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  5. Sobic.007G120200.2

Sobic.007G120200.2


Description : subfamily ABCA transporter


Gene families : OG_42_0000851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G120200.2
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Brara.F01725.1 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
HORVU6Hr1G038520.24 No alias subfamily ABCA transporter 0.03 Orthogroups_2024-Update
LOC_Os02g11960 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s266_1V6 No alias abc transporter cholesterol phospholipid flippase 0.02 Orthogroups_2024-Update
Pp1s46_20V6 No alias abc transporter cholesterol phospholipid flippase 0.02 Orthogroups_2024-Update
Solyc03g113060 No alias ABC transporter A family protein (AHRD V3.3 *** A0A072UUA7_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 637 781
No external refs found!