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  5. At4g00160

At4g00160


Description : F-box/FBD/LRR-repeat protein At4g00160 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF09]


Gene families : OG_42_0000413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g00160
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
At5g60610 No alias FBD-associated F-box protein At5g60610... 0.03 Orthogroups_2024-Update
Brara.D01518.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D02649.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00515.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02632.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I03750.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00771.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G325500 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Orthogroups_2024-Update
Potri.006G244700 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 53
IPR013101 Leu-rich_rpt_2 167 192
IPR006566 FBD 359 404
No external refs found!