1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G130300.1

Sobic.007G130300.1


Description : component *(SHL/EBS) of PRC1 complex


Gene families : OG_42_0001066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001066_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G130300.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Bradi4g29560 No alias PHD finger family protein / bromo-adjacent homology... 0.01 Orthogroups_2024-Update
LOC_Os03g58530 No alias ES43 protein, putative, expressed 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001025 BAH_dom 82 194
IPR019787 Znf_PHD-finger 199 247
No external refs found!