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  5. Sobic.007G133900.1

Sobic.007G133900.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G133900.1
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
A4A49_20624 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
A4A49_23060 No alias germacrene c synthase 0.03 Orthogroups_2024-Update
A4A49_36773 No alias germacrene c synthase 0.04 Orthogroups_2024-Update
At1g31950 No alias Terpenoid cyclases/Protein prenyltransferases... 0.03 Orthogroups_2024-Update
At1g70080 No alias Dolabella-3,7-dien-18-ol synthase TPS06... 0.02 Orthogroups_2024-Update
At3g29410 No alias Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1] 0.02 Orthogroups_2024-Update
At5g23960 No alias Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... 0.03 Orthogroups_2024-Update
Bradi3g15956 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Bradi4g04965 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g04987 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Brara.A01099.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Brara.I01686.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Brara.K00915.1 No alias EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.K01797.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Glyma.12G138800 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
HORVU5Hr1G004370.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
LOC_Os03g22634 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g27540 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g04500 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G066400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.7G145900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.8G192000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.04 Orthogroups_2024-Update
Solyc01g101220 No alias Viridiflorene synthase (AHRD V3.3 *-* TPS32_SOLLC) 0.03 Orthogroups_2024-Update
Solyc07g052120 No alias Sesquiterpene synthase (AHRD V3.3 *-* G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Sopen12g002520 No alias Terpene synthase family, metal binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 220 484
IPR001906 Terpene_synth_N 18 188
No external refs found!