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  5. Sobic.007G136500.2

Sobic.007G136500.2


Description : MYB class-R2R3 subgroup-8 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G136500.2
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
At1g68320 No alias Transcription factor MYB62... 0.03 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.02 Orthogroups_2024-Update
At5g40330 No alias Transcription factor MYB23... 0.03 Orthogroups_2024-Update
Bradi4g16290 No alias myb domain protein 60 0.04 Orthogroups_2024-Update
Brara.A01271.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.03 Orthogroups_2024-Update
GRMZM2G123202 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
GRMZM2G177760 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
GRMZM5G833253 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.05 Orthogroups_2024-Update
Seita.3G350800.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G039100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!