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  5. Sobic.007G137300.2

Sobic.007G137300.2


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G137300.2
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
A4A49_18735 No alias myb family transcription factor phl11 0.03 Orthogroups_2024-Update
Bradi1g31837 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g27620 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
GRMZM2G039074 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G153900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.15G083600 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
HORVU5Hr1G047920.4 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
HORVU5Hr1G054350.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Kfl00262_0120 kfl00262_0120_v1.... (at2g01060 : 94.0) myb-like HTH transcriptional... 0.01 Orthogroups_2024-Update
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
Potri.001G137600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G071700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.03 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.009G178000.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sopen06g016880 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_4486.1 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 122 161
No external refs found!