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  5. Sobic.007G144000.1

Sobic.007G144000.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000883 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G144000.1
Cluster HCAA Clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
A4A49_05659 No alias ring-h2 finger protein atl13 0.02 Orthogroups_2024-Update
Bradi1g46992 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.006G176700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Solyc02g067680 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G40250.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 153 196
No external refs found!