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  5. Sobic.007G146100.1

Sobic.007G146100.1


Description : group-II formin actin filament elongation factor


Gene families : OG_42_0000436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G146100.1
Cluster HCAA Clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Bradi1g22717 No alias actin binding 0.05 Orthogroups_2024-Update
Cre03.g166700 No alias actin binding 0.01 Orthogroups_2024-Update
Cre06.g311250 No alias actin binding 0.01 Orthogroups_2024-Update
Glyma.09G215100 No alias actin binding 0.03 Orthogroups_2024-Update
MA_134166g0010 No alias (at1g31810 : 597.0) Encodes the Type II Arabidopsis... 0.02 Orthogroups_2024-Update
MA_4962g0010 No alias (at5g58160 : 520.0) actin binding; FUNCTIONS IN: actin... 0.02 Orthogroups_2024-Update
PSME_00023301-RA No alias (at5g58160 : 490.0) actin binding; FUNCTIONS IN: actin... 0.02 Orthogroups_2024-Update
Sobic.004G329400.3 No alias group-II formin actin filament elongation factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 808 1181
IPR014020 Tensin_C2-dom 200 336
No external refs found!