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  5. Sobic.007G160400.1

Sobic.007G160400.1


Description : zf-HD-type transcription factor


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G160400.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At1g69600 No alias Zinc-finger homeodomain protein 11... 0.02 Orthogroups_2024-Update
Bradi4g43960 No alias mini zinc finger 0.03 Orthogroups_2024-Update
Brara.I01078.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G100000 No alias mini zinc finger 0.03 Orthogroups_2024-Update
HORVU5Hr1G069730.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
MA_101972g0010 No alias (at4g24660 : 189.0) homeobox protein 22 (HB22); CONTAINS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 75 127
No external refs found!