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  5. Sobic.007G162000.1

Sobic.007G162000.1


Description : Unknown function


Gene families : OG_42_0000240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G162000.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Brara.D02683.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F02769.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J00689.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.04 Orthogroups_2024-Update
Glyma.05G039800 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Glyma.17G231500 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
LOC_Os01g07570 No alias carboxyl-terminal proteinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g37000 No alias carboxyl-terminal peptidase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g07764 No alias carboxyl-terminal proteinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g10530 No alias carboxyl-terminal peptidase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.013G050900 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Pp1s55_224V6 No alias T24C20.110; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G101000.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.03 Orthogroups_2024-Update
Seita.5G120400.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.03 Orthogroups_2024-Update
Solyc01g081570 No alias carboxyl-terminal peptidase (DUF239) (AHRD V3.3 *** AT2G44210.1) 0.04 Orthogroups_2024-Update
Solyc06g071590 No alias carboxyl-terminal peptidase (DUF239) (AHRD V3.3 *** AT5G18460.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004314 Neprosin 315 542
IPR025521 Neprosin_propep 138 289
No external refs found!