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  5. Sobic.007G167300.1

Sobic.007G167300.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G167300.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_05295 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.B02918.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F01503.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.12G083000 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
PSME_00002134-RA No alias (at1g76590 : 113.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00035067-RA No alias (at2g12646 : 150.0) PLATZ transcription factor family... 0.02 Orthogroups_2024-Update
Seita.1G070800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Seita.1G279800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 72 150
No external refs found!