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  5. Sobic.007G174300.1

Sobic.007G174300.1


Description : Unknown function


Gene families : OG_42_0000584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G174300.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G107420.10 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU3Hr1G107550.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU3Hr1G107610.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.6G083200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G041300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.007G174800.2 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0048364 root development IEA 16Dec
BP GO:0048367 shoot system development IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR004320 DUF241_pln 45 232
No external refs found!