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  5. Sobic.007G187100.1

Sobic.007G187100.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G187100.1
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
A4A49_08386 No alias 5-epi-aristolochene synthase 3 0.02 Orthogroups_2024-Update
A4A49_57439 No alias putative 5-epi-aristolochene synthase 4 0.02 Orthogroups_2024-Update
A4A49_60718 No alias 5-epi-aristolochene synthase 0.02 Orthogroups_2024-Update
Bradi3g14710 No alias terpene synthase 02 0.04 Orthogroups_2024-Update
Bradi4g04965 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g04987 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 Orthogroups_2024-Update
Brara.K01719.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
GRMZM2G084496 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
GRMZM2G177098 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
HORVU5Hr1G004700.3 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
LOC_Os01g23530 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g26014 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g27670 No alias terpene synthase family, metal binding domain containing... 0.03 Orthogroups_2024-Update
LOC_Os08g04500 No alias terpene synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G415100 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Seita.7G013300.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.002G065600.2 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Sobic.007G035800.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc06g059920 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g051940 No alias Sesquiterpene synthase (AHRD V3.3 *** G8H5N2_SOLHA) 0.03 Orthogroups_2024-Update
Sopen01g044650 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 240 505
IPR001906 Terpene_synth_N 31 209
No external refs found!