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  5. Sobic.007G189100.1

Sobic.007G189100.1


Description : class I ARF-GAP ARF-GTPase-activating protein


Gene families : OG_42_0001461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G189100.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_16362 No alias adp-ribosylation factor gtpase-activating protein agd3 0.03 Orthogroups_2024-Update
At5g13300 No alias ADP-ribosylation factor GTPase-activating protein AGD3... 0.01 Orthogroups_2024-Update
Brara.B03783.1 No alias class I ARF-GAP ARF-GTPase-activating protein 0.02 Orthogroups_2024-Update
Brara.I01541.1 No alias class I ARF-GAP ARF-GTPase-activating protein 0.07 Orthogroups_2024-Update
Glyma.18G282000 No alias ARF GTPase-activating protein 0.01 Orthogroups_2024-Update
LOC_Os09g33600 No alias ARF GTPase-activating domain-containing protein,... 0.02 Orthogroups_2024-Update
PSME_00011519-RA No alias (at5g13300 : 820.0) Belongs to 15-member small GTPase... 0.02 Orthogroups_2024-Update
Sobic.002G260700.1 No alias class I ARF-GAP ARF-GTPase-activating protein 0.01 Orthogroups_2024-Update
Sopen05g018360 No alias Putative GTPase activating protein for Arf 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 501 630
IPR002110 Ankyrin_rpt 736 820
IPR001849 PH_domain 294 426
No external refs found!