1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G207200.1

Sobic.007G207200.1


Description : subunit beta of phenylalanine-tRNA ligase complex


Gene families : OG_42_0005692 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005692_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G207200.1
Cluster HCAA Clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Kfl00079_0090 kfl00079_0090_v1.1 (at1g72550 : 716.0) tRNA synthetase beta subunit family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0004826 phenylalanine-tRNA ligase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004730 pseudouridylate synthase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005147 tRNA_synthase_B5-dom 311 379
IPR005146 B3/B4_tRNA-bd 121 282
No external refs found!