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  5. Sobic.007G210801.1

Sobic.007G210801.1


Description : histone demethylase *(PKDM12)


Gene families : OG_42_0004194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G210801.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39950 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.05 Orthogroups_2024-Update
Bradi4g33727 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Orthogroups_2024-Update
GRMZM2G052908 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
LOC_Os08g39810 No alias retrotransposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
Pp1s105_124V6 No alias jumonji domain containing 5 0.02 Orthogroups_2024-Update
Seita.6G205100.1 No alias histone demethylase *(PKDM12) 0.04 Orthogroups_2024-Update
Solyc01g006680 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!