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  5. Sobic.007G212200.3

Sobic.007G212200.3


Description : Unknown function


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G212200.3
Cluster HCAA Clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
A4A49_17875 No alias zinc finger a20 and an1 domain-containing... 0.04 Orthogroups_2024-Update
At2g27580 No alias Zinc finger A20 and AN1 domain-containing... 0.05 Orthogroups_2024-Update
At4g25380 No alias Zinc finger A20 and AN1 domain-containing... 0.04 Orthogroups_2024-Update
Bradi1g06190 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Brara.I02280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03583.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G083894 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.11G153700 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G238400 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.15G272300 No alias A20/AN1-like zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.19G193800 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G072920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G050270.3 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_91228g0010 No alias (at2g36320 : 83.6) A20/AN1-like zinc finger family... 0.04 Orthogroups_2024-Update
Potri.015G131900 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.6G159700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G138000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G155901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen09g004350 No alias AN1-like Zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002653 Znf_A20 21 43
IPR000058 Znf_AN1 117 154
No external refs found!