At4g00940

Description : Dof zinc finger protein DOF4.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M161]

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g00940
Cluster	HCCA clusters: Cluster_243

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12086	No alias	cyclic dof factor 2	0.03	Orthogroups_2024-Update
At2g34140	No alias	Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]	0.03	Orthogroups_2024-Update
Bradi2g19930	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Bradi4g04260	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
GRMZM5G880268	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.13G335200	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
LOC_Os08g38220	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.03	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Seita.1G290700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.001G078700.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Sobic.007G223200.2	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.06	Orthogroups_2024-Update
Solyc06g005130	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA)	0.03	Orthogroups_2024-Update
Sopen04g026890	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
BP	GO:0008535	respiratory chain complex IV assembly	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
BP	GO:0017004	cytochrome complex assembly	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Predicted GO
BP	GO:0033617	mitochondrial respiratory chain complex IV assembly	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	66	122

External Links

No external refs found!

At4g00940

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation