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  5. Sobic.007G217000.1

Sobic.007G217000.1


Description : component *(Pex5) of cargo-receptor system


Gene families : OG_42_0006395 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G217000.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi3g39510 No alias peroxin 5 0.02 Orthogroups_2024-Update
Potri.011G170000 No alias peroxin 5 0.02 Orthogroups_2024-Update
evm.model.contig_2503.2 No alias "(at5g56290 : 222.0) Encodes the peroxisomal targeting... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 596 629
No external refs found!