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  5. Sobic.007G220100.1

Sobic.007G220100.1


Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G220100.1
Cluster HCAA Clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Bradi1g36250 No alias RING domain ligase1 0.03 Orthogroups_2024-Update
Mp6g16430.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 Orthogroups_2024-Update
PSME_00007424-RA No alias (at5g14420 : 142.0) RING domain ligase2 (RGLG2);... 0.03 Orthogroups_2024-Update
Pp1s30_112V6 No alias rglg2 (ring domain ligase2) ubiquitin-protein ligase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 88 303
No external refs found!