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  5. Sobic.007G221400.1

Sobic.007G221400.1


Description : oligopeptide transporter *(OPT)


Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G221400.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
At1g09930 No alias Oligopeptide transporter 2... 0.03 Orthogroups_2024-Update
Bradi1g08421 No alias oligopeptide transporter 0.04 Orthogroups_2024-Update
LOC_Os08g38400 No alias oligopeptide transporter, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00026390-RA No alias (at5g64410 : 851.0) oligopeptide transporter;... 0.03 Orthogroups_2024-Update
Potri.009G079500 No alias oligopeptide transporter 4 0.02 Orthogroups_2024-Update
Seita.6G193400.1 No alias oligopeptide transporter *(OPT) 0.04 Orthogroups_2024-Update
Sobic.010G015500.1 No alias oligopeptide transporter *(OPT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 62 721
No external refs found!