Description : Unknown function
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.007G224300.1 | |
Cluster | HCAA Clusters: Cluster_206 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g49196 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g34010 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
Bradi3g38870 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G053210 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G101400 | No alias | RING-H2 finger C1A | 0.05 | Orthogroups_2024-Update | |
Glyma.16G213500 | No alias | RING/U-box superfamily protein | 0.06 | Orthogroups_2024-Update | |
LOC_Os12g04090 | No alias | zinc finger, C3HC4 type domain containing protein | 0.03 | Orthogroups_2024-Update | |
MA_816375g0010 | No alias | (at2g40830 : 158.0) Encodes a putative RING-H2 finger... | 0.04 | Orthogroups_2024-Update | |
Potri.001G231000 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Potri.008G087200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s223_128V6 | No alias | MPN9.20; zinc finger (C3HC4-type RING finger) family... | 0.02 | Orthogroups_2024-Update | |
Seita.3G157000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G253600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G371300.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.002G211900.1 | No alias | signal transducer of abscisic acid perception *(AIP2) | 0.04 | Orthogroups_2024-Update | |
Sopen08g021220 | No alias | Ring finger domain | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 229 | 272 |
No external refs found! |