1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G226600.3

Sobic.007G226600.3


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G226600.3
Cluster HCAA Clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
At3g61890 No alias HB-12 [Source:UniProtKB/TrEMBL;Acc:A0A178VND2] 0.03 Orthogroups_2024-Update
Brara.B00590.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02910.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H01761.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J02798.1 No alias regulatory protein *(LMI1) of floral meristem identity... 0.03 Orthogroups_2024-Update
Glyma.02G019100 No alias Homeobox-leucine zipper protein family 0.03 Orthogroups_2024-Update
Glyma.05G030000 No alias homeobox 1 0.03 Orthogroups_2024-Update
Glyma.19G021100 No alias homeobox 3 0.02 Orthogroups_2024-Update
MA_130615g0020 No alias (at2g22430 : 152.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_19453g0040 No alias (at3g01470 : 183.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00000196-RA No alias (at3g01470 : 176.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00017541-RA No alias (at2g22430 : 139.0) Encodes a homeodomain leucine zipper... 0.05 Orthogroups_2024-Update
Potri.005G161500 No alias homeobox protein 16 0.03 Orthogroups_2024-Update
Potri.015G065400 No alias homeobox 1 0.03 Orthogroups_2024-Update
Pp1s143_73V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Pp1s154_145V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Pp1s57_194V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.002G189000.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g062960 No alias Homeobox-leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g077590 No alias Homeobox-leucine zipper protein family (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g113270 No alias LEVAHOX1G L.esculentum homeobox 0.05 Orthogroups_2024-Update
Sopen02g032560 No alias Homeobox domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 108 149
IPR001356 Homeobox_dom 52 106
No external refs found!