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  5. Sobic.008G005100.2

Sobic.008G005100.2


Description : xylan O-acetyltransferase *(XOAT)


Gene families : OG_42_0003177 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G005100.2
Cluster HCAA Clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44860 No alias TRICHOME BIREFRINGENCE-LIKE 34 0.02 Orthogroups_2024-Update
Brara.D02339.1 No alias xylan O-acetyltransferase *(XOAT) 0.02 Orthogroups_2024-Update
HORVU5Hr1G047630.1 No alias xylan O-acetyltransferase *(XOAT) 0.03 Orthogroups_2024-Update
Sopen02g027740 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.05 Orthogroups_2024-Update
Sopen09g009000 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 157 449
IPR025846 PMR5_N_dom 102 156
No external refs found!