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  5. Sobic.008G008500.1

Sobic.008G008500.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.008G008500.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44750 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.17G029200 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G039940.1 No alias clade E phosphatase 0.05 Orthogroups_2024-Update
PSME_00022377-RA No alias (at3g02750 : 283.0) Protein phosphatase 2C family... 0.04 Orthogroups_2024-Update
PSME_00026581-RA No alias (at3g02750 : 183.0) Protein phosphatase 2C family... 0.03 Orthogroups_2024-Update
Sobic.009G109700.1 No alias clade E phosphatase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 195 389
No external refs found!